Wednesday, June 19 2024
14:00 - 15:30

* VenueE C G Sudarshan Hall
* SpeakerPinaki Swain
* TitlePhase separation influences chromatin structure, dynamics and gene expression noise
AffiliationIMSc
AbstractUnderstanding the physical principles governing chromatin organization is an important problem in cell biology. We propose phase separation of DNA-binding proteins as a possible mechanism influencing chromatin organization. We use a simple polymer model of chromatin and interacting particles as DNA-binding proteins. We show that by tuning the concentration of DNA-binding proteins and protein-protein interaction, it is possible to reconcile the apparent discrepancies between existing models. In the second part, I will discuss the forces involved in DNA-protein cocondensation and the role of DNA sequence heterogeneity. I will end the talk by stating an ongoing work about the interplay of gene expression noise and phase separation.
* Announcement?None
* Refreshments?None
* Honorarium?None
Special Arrangements?None
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