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       SEQUENCE ALIGNMENT

 

BoxShade

 

                Printouts from multiple-aligned sequences

ClustalW  

 

                Multiple sequence alignment

CINEMA  

 

               Colour interactive editor for multiple alignments 

DiAlign

 

              Multiple alignment

Display 

 

             Compares the sequences in an alignment to its consensus

FLAG 

 

            Fast Local Alignment for Gigabases

Malign  

 

           Multiple sequence alignment

MultAlin 

 

            Multiple sequence alignment by Florence Corpet

Multiple Alignement  

 

           Multiple sequence alignment

MUMmer

 

           Alignment of large scale DNA and Proteins

Pair Alignement  

 

          Pairwise sequence alignment

PipMaker

 

          Aligns similar regions in two DNA sequences

SIM4

 

           a program to align cDNA and genomic DNA 

STRETCHER

 

           Best global alignment between two sequences

 

 

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