ASTRAL

 

Sequences of domains of known structure, selected subsets, and sequence-structure correspondences

BioImage

 

Searchable database of multidimensional biological images

 

BioMagResBank

 

NMR spectroscopic data from proteins, peptides, and nucleic acids 

CADB: Conformational Angles DataBase of Proteins   

 

Conformation angles of protein structures, with associated crystallographic data

CATH   

 

Protein domain structures

 

CE

 

CE: A Resource to Compute and Review 3-D Protein Structure Alignments 

CKAAPs DB

 

Structurally-similar proteins with dissimilar sequences

CSD

 

Crystal structure information for organic and metal organic compounds.

Database of Macromolecular Movements

 

Descriptions of protein and macromolecular motions, including movies

 

Decoys 'R' Us

 

Computer-generated protein conformations based on sequence data
DSDBASE   

 

Native and modeled disulfide bonds in proteins

DSMM - a Database of Simulated Molecular Motions   

 

Database of Simulated Molecular Motions

 

GTOP   

 

Protein fold predictions from genome sequences

HIC-Up

 

Structures of small molecules (³hetero-compounds²)

 

HSSP

 

Structural families and alignments; structurarlly-conserved regions and domain architecture 

 

IMB Jena Image Library of Biological Macromolecules 

 

Visualization and analysis of three-dimensional biopolymer structures

ISSD

 

Integrated sequence and structural information

 

LPFC

 

Library of protein family core structures

 

MMDB

 

All experimentally-determined three-dimensional structures, linked to NCBI Entrez

ModBase   

 

Annotated comparative protein structure models

 

NDB

 

Nucleic acid-containing structures

 

NTDB   

 

Thermodynamic data for nucleic acids 

 

PALI   

 

Phylogeny and alignment of homologous protein structures

 

PASS2   

 

Structural motifs of protein superfamilies

PDB

 

Structure data determined by X-ray crystallography and NMR

 

PDB-REPRDB   

 

Representative protein chains, based on PDB entries

 

PDBsum   

 

Summary of key information on structures in PDB

PRESAGE   

 

Protein structures with experimental and predictive annotations

 

ProTherm

 

Thermodynamic data for wild-type and mutant proteins

 

RESID

 

Protein structure modifications

 

RNABase

 

RNA-containing structures from PDB and NDB

SCOP   

 

Familial and structural protein relationships

SCOR   

 

RNA structural relationships

 

SLoop

 

Classification of protein loops

 

SUPERFAMILY

 

Assignments of proteins to structural superfamilies